HIV Target gene Detail Information

> ARID4B Gene Search Result

Gene Information

Gene Name	ARID4B
Gene ID	51742
Gene Full Name	AT-rich interaction domain 4B
Gene Alias	BCAA; BRCAA1; RBP1L1; SAP180; RBBP1L1
Transcripts	ENSG00000054267
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Mitochondria;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins, Transcription factors
Uniport_ID	Q4LE39
HGNC ID	HGNC:15550
VEGA ID	OTTHUMG00000039621
OMIM ID	609696
String ID	9606.ENSP00000264183
PharmGKB ID	PA134940494

Target gene [ARID4B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004050	chr1	49	1		50	View
4004380	chr1	41	4		45	View
4006037	chr1	23	4		27	View
4006178	chr1	22	2	2	26	View
4010480	chr1		8	1	9	View
4010990	chr1	3	4		7	View
4011867	chr1	2	4		6	View
4016475	chr1				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ARID4B expression and immune infiltrating cell level correlation result in HIV+ samples
ARID4B expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of ARID4B expression and immune infiltrating cell level correlation result in HIV+ samples
ARID4B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).