HIV Target gene Detail Information

> ARID4A Gene Search Result

Gene Information

Gene Name	ARID4A
Gene ID	5926
Gene Full Name	AT-rich interaction domain 4A
Gene Alias	RBP1; RBBP1; RBP-1; RBBP-1
Transcripts	ENSG00000032219
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytosol;Plasma membrane;
HPA Protein Class Info	Predicted intracellular proteins, Transcription factors
Uniport_ID	P29374
HGNC ID	HGNC:9885
VEGA ID	OTTHUMG00000140320
OMIM ID	180201
String ID	9606.ENSP00000347602
PharmGKB ID	PA34249

Target gene [ARID4A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000016	chr14	1009	519	1290	2818	View
4008929	chr14	13			13	View
4010285	chr14	6	3		9	View
4012578	chr14	4	1		5	View
4012579	chr14	4	1		5	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ARID4A expression and immune infiltrating cell level correlation result in HIV+ samples
ARID4A expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of ARID4A expression and immune infiltrating cell level correlation result in HIV+ samples
ARID4A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).