HIV Target gene Detail Information

> ARID1A Gene Search Result

Gene Information

Gene Name	ARID1A
Gene ID	8289
Gene Full Name	AT-rich interaction domain 1A
Gene Alias	ELD; B120; CSS2; OSA1; P270; hELD; BM029; MRD14; hOSA1; BAF250; C1orf4; BAF250a; SMARCF1
Transcripts	ENSG00000117713
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors
Gene Function	Suppressor gene
Uniport_ID	O14497
HGNC ID	HGNC:11110
VEGA ID	OTTHUMG00000004004
OMIM ID	603024
String ID	9606.ENSP00000320485
PharmGKB ID	PA35960

Target gene [ARID1A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001571	chr1	85	52	12	149	View
4002506	chr1	35	12	44	91	View
4002863	chr1	60	3	14	77	View
4003502	chr1	5	53	2	60	View
4003689	chr1	21	2	33	56	View
4003986	chr1	11	34	6	51	View
4005533	chr1	31			31	View
4005655	chr1	25	5		30	View
4006139	chr1	18	8	1	27	View
4006405	chr1	24	1		25	View
4006562	chr1	22	2		24	View
4006622	chr1	12	9	2	23	View
4007375	chr1	15	4		19	View
4007597	chr1	4	12	2	18	View
4007884	chr1	17			17	View
4009003	chr1	11	1	1	13	View
4011151	chr1	3	4		7	View
4012035	chr1	5			5	View
4013401	chr1	3			3	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).