HIV Target gene Detail Information

> ARHGEF39 Gene Search Result

Gene Information

Gene Name	ARHGEF39
Gene ID	84904
Gene Full Name	Rho guanine nucleotide exchange factor 39
Gene Alias	C9orf100
Transcripts	ENSG00000137135
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8N4T4
HGNC ID	HGNC:25909
VEGA ID	OTTHUMG00000019869
String ID	9606.ENSP00000367638
PharmGKB ID	PA134939297

Target gene [ARHGEF39] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002313	chr9	95	1	4	100	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ARHGEF39 expression and immune infiltrating cell level correlation result in HIV+ samples
ARHGEF39 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).