HTLV1 Target gene Detail Information

> ARHGEF3 Gene Search Result


Gene Information
Gene Name ARHGEF3
Gene ID 50650
Gene Full Name Rho guanine nucleotide exchange factor 3
Gene Alias GEF3; STA3; XPLN
Transcripts ENSG00000163947
Virus HTLV1
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9NR81
HGNC ID HGNC:683
VEGA ID OTTHUMG00000158857
OMIM ID 612115
String ID 9606.ENSP00000341071
PharmGKB ID PA24973
Target gene [ARHGEF3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001627 chr3 314 54 15 383 View
6004130 chr3 14 62 52 128 View
6004594 chr3 22 88 1 111 View
6011576 chr3 26 26 View
6014497 chr3 15 1 16 View
6016797 chr3 1 10 11 View
6018021 chr3 10 10 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).