HBV Target gene Detail Information

> ARHGAP8 Gene Search Result


Gene Information
Gene Name ARHGAP8
Gene ID 23779
Gene Full Name Rho GTPase activating protein 8
Gene Alias PP610; BPGAP1
Transcripts ENSG00000241484
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID P85298
HGNC ID HGNC:677
VEGA ID OTTHUMG00000030234
OMIM ID 609405
String ID 9606.ENSP00000374424
PharmGKB ID PA24961
Target gene [ARHGAP8] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001551 chr22 37 471 117 625 View
1404671 chr22 31 3 34 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ARHGAP8 expression and immune infiltrating cell level correlation result in HBV+ samples
ARHGAP8 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).