HIV Target gene Detail Information

> ARHGAP39 Gene Search Result

Gene Information

Gene Name	ARHGAP39
Gene ID	80728
Gene Full Name	Rho GTPase activating protein 39
Gene Alias	CrGAP; Vilse
Transcripts	ENSG00000147799
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Cytokinetic bridge;Microtubules;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9C0H5
HGNC ID	HGNC:29351
VEGA ID	OTTHUMG00000165182
OMIM ID	615880
String ID	9606.ENSP00000366522
PharmGKB ID	PA165585391

Target gene [ARHGAP39] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004819	chr8	35	1	3	39	View
4009988	chr8	10			10	View
4015463	chr8	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ARHGAP39 expression and immune infiltrating cell level correlation result in HIV+ samples
ARHGAP39 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).