HIV Target gene Detail Information

> APOBEC4 Gene Search Result


Gene Information
Gene Name APOBEC4
Gene ID 403314
Gene Full Name apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4
Gene Alias C1orf169
Transcripts ENSG00000173627
Virus HIV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8WW27
HGNC ID HGNC:32152
VEGA ID OTTHUMG00000035459
OMIM ID 609908
String ID 9606.ENSP00000310622
PharmGKB ID PA142672597
Target gene [APOBEC4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4015211 chr1 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of APOBEC4 expression and immune infiltrating cell level correlation result in HIV+ samples
APOBEC4 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).