HIV Target gene Detail Information

> APOBEC3F Gene Search Result


Gene Information
Gene Name APOBEC3F
Gene ID 200316
Gene Full Name apolipoprotein B mRNA editing enzyme catalytic subunit 3F
Gene Alias A3F; KA6; ARP8; BK150C2.4.MRNA
Transcripts ENSG00000128394
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8IUX4
HGNC ID HGNC:17356
VEGA ID OTTHUMG00000151080
OMIM ID 608993
String ID 9606.ENSP00000309749
PharmGKB ID PA24896
Target gene [APOBEC3F] related to virus gene/protein/region
ID PMID Mutation Gene/Protein/Region Description Detail
1 16201018 G143R
Vif
S
View
2 16201018 E45G
Vif
S
View
3 16201018 Y40H
Vif
S
View
4 16201018 K22E
Vif
S
View
5 16201018 G185R
Vif
S
View
6 24422669 H108A
Vif
View
7 24422669 I31A
Vif
View
8 24422669 Y30A
Vif
View
9 24422669 M29A
Vif
View
10 24422669 H28A
Vif
View
11 24422669 H27A
Vif
View
12 24422669 V25A
Vif
View
13 24422669 L24A
Vif
View
14 24422669 R23A
Vif
View
15 24418540 E88A
Vif
View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).