HBV Target gene Detail Information

> APBA1 Gene Search Result

Gene Information

Gene Name	APBA1
Gene ID	320
Gene Full Name	amyloid beta precursor protein binding family A member 1
Gene Alias	X11; X11A; LIN10; MINT1; D9S411E; X11ALPHA
Transcripts	ENSG00000276497
Virus	HBV
Gene Type	protein coding
HPA Location Info	Golgi apparatus;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q02410
HGNC ID	HGNC:578
VEGA ID	OTTHUMG00000175384
OMIM ID	602414
String ID	9606.ENSP00000265381
PharmGKB ID	PA24869

Target gene [APBA1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1001570	chr9	147	157	306	610	View
1004787	chr9	9	51	9	69	View
1007998	chr9	13	4	6	23	View
1010012	chr9	13			13	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of APBA1 expression and immune infiltrating cell level correlation result in HBV+ samples
APBA1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).