HIV Target gene Detail Information

> AP2A1 Gene Search Result


Gene Information
Gene Name AP2A1
Gene ID 160
Gene Full Name adaptor related protein complex 2 subunit alpha 1
Gene Alias ADTAA; CLAPA1; AP2-ALPHA
Transcripts ENSG00000196961
Virus HIV
Gene Type protein coding
HPA Location Info Vesicles;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID O95782
HGNC ID HGNC:561
VEGA ID OTTHUMG00000183253
OMIM ID 601026
String ID 9606.ENSP00000351926
PharmGKB ID PA24852
Target gene [AP2A1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4005704 chr19 2 19 9 30 View
4010049 chr19 10 10 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of AP2A1 expression and immune infiltrating cell level correlation result in HIV+ samples
AP2A1 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of AP2A1 expression and immune infiltrating cell level correlation result in HIV+ samples
AP2A1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).