HIV Target gene Detail Information

> ANKRD44-IT1 Gene Search Result

Gene Information

Gene Name	ANKRD44-IT1
Gene ID	101927547
Transcripts	ENSG00000236977
Virus	HIV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:41477
lncRNASNP2 ID	NONHSAG030169.2

Target gene [ANKRD44-IT1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001420	chr2	7	38	122	167	View
4004803	chr2	19	14	6	39	View
4011385	chr2		1	6	7	View
4013192	chr2	1	3		4	View
4015656	chr2	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ANKRD44-IT1 expression and immune infiltrating cell level correlation result in HIV+ samples
ANKRD44-IT1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).