Home
Virus
Gene
Disease
Dataset
Download
Help
 
HIV Target gene Detail Information

> ANKRD44 Gene Search Result


Gene Information
Gene Name ANKRD44
Gene ID 91526
Gene Full Name ankyrin repeat domain 44
Gene Alias PP6-ARS-B
Transcripts ENSG00000065413
Virus HIV
Gene Type protein coding
HPA Location Info Mitochondria;Nuclear speckles;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8N8A2
HGNC ID HGNC:25259
VEGA ID OTTHUMG00000154411
String ID 9606.ENSP00000282272
PharmGKB ID PA142672611
Target gene [ANKRD44] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000550 chr2 44 107 226 377 View
4000806 chr2 176 14 86 276 View
4002774 chr2 33 33 15 81 View
4003892 chr2 3 9 41 53 View
4006884 chr2 13 6 3 22 View
4007851 chr2 13 4 17 View
4009031 chr2 13 13 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ANKRD44 expression and immune infiltrating cell level correlation result in HIV+ samples
ANKRD44 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of ANKRD44 expression and immune infiltrating cell level correlation result in HIV+ samples
ANKRD44 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).