HTLV1 Target gene Detail Information

> ANKRD33B Gene Search Result


Gene Information
Gene Name ANKRD33B
Gene ID 651746
Gene Full Name ankyrin repeat domain 33B
Transcripts ENSG00000164236
Virus HTLV1
Gene Type protein coding
HPA Location Info Mitochondria;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID A6NCL7
HGNC ID HGNC:35240
VEGA ID OTTHUMG00000162050
String ID 9606.ENSP00000296657
PharmGKB ID PA164715326
Target gene [ANKRD33B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004732 chr5 83 21 2 106 View
6006025 chr5 21 6 49 76 View
6007719 chr5 28 17 7 52 View
6017416 chr5 3 7 10 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of ANKRD33B expression and immune infiltrating cell level correlation result in HTLV1+ samples
ANKRD33B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).