HBV Target gene Detail Information

> ANKRD30A Gene Search Result


Gene Information
Gene Name ANKRD30A
Gene ID 91074
Gene Full Name ankyrin repeat domain 30A
Gene Alias NY-BR-1
Transcripts ENSG00000148513
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9BXX3
HGNC ID HGNC:17234
VEGA ID OTTHUMG00000017968
OMIM ID 610856
String ID 9606.ENSP00000354432
PharmGKB ID PA134974407
Target gene [ANKRD30A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1018045 chr10 0 View
1018046 chr10 0 View
1018047 chr10 0 View
1018048 chr10 0 View
1400014 chr10 25 29 79 133 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ANKRD30A expression and immune infiltrating cell level correlation result in HBV+ samples
ANKRD30A expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).