HIV Target gene Detail Information

> ANKMY1 Gene Search Result


Gene Information
Gene Name ANKMY1
Gene ID 51281
Gene Full Name ankyrin repeat and MYND domain containing 1
Gene Alias ZMYND13
Transcripts ENSG00000144504
Virus HIV
Gene Type protein coding
HPA Location Info Nuclear bodies;Cytosol;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9P2S6
HGNC ID HGNC:20987
VEGA ID OTTHUMG00000133355
String ID 9606.ENSP00000385887
PharmGKB ID PA134925670
Target gene [ANKMY1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001728 chr2 95 36 5 136 View
4012106 chr2 3 2 5 View
4016635 chr2 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ANKMY1 expression and immune infiltrating cell level correlation result in HIV+ samples
ANKMY1 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of ANKMY1 expression and immune infiltrating cell level correlation result in HIV+ samples
ANKMY1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).