HIV Target gene Detail Information

> ANKFN1 Gene Search Result

Gene Information

Gene Name	ANKFN1
Gene ID	162282
Gene Full Name	ankyrin repeat and fibronectin type III domain containing 1
Transcripts	ENSG00000153930
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Plasma membrane;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8N957
HGNC ID	HGNC:26766
VEGA ID	OTTHUMG00000155010
String ID	9606.ENSP00000321627
PharmGKB ID	PA142672624

Target gene [ANKFN1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4011517	chr17	6			6	View
4012024	chr17	5			5	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ANKFN1 expression and immune infiltrating cell level correlation result in HIV+ samples
ANKFN1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).