HIV Target gene Detail Information

> ANKFN1 Gene Search Result


Gene Information
Gene Name ANKFN1
Gene ID 162282
Gene Full Name ankyrin repeat and fibronectin type III domain containing 1
Transcripts ENSG00000153930
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Plasma membrane;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8N957
HGNC ID HGNC:26766
VEGA ID OTTHUMG00000155010
String ID 9606.ENSP00000321627
PharmGKB ID PA142672624
Target gene [ANKFN1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4011517 chr17 6 6 View
4012024 chr17 5 5 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ANKFN1 expression and immune infiltrating cell level correlation result in HIV+ samples
ANKFN1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).