HIV Target gene Detail Information

> ANKAR Gene Search Result


Gene Information
Gene Name ANKAR
Gene ID 150709
Gene Full Name ankyrin and armadillo repeat containing
Transcripts ENSG00000151687
Virus HIV
Gene Type protein coding
HPA Location Info Centriolar satellite;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q7Z5J8
HGNC ID HGNC:26350
VEGA ID OTTHUMG00000154398
OMIM ID 609803
String ID 9606.ENSP00000427882
PharmGKB ID PA145149868
Target gene [ANKAR] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4009339 chr2 12 12 View
4011843 chr2 6 6 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ANKAR expression and immune infiltrating cell level correlation result in HIV+ samples
ANKAR expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of ANKAR expression and immune infiltrating cell level correlation result in HIV+ samples
ANKAR expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).