HBV Target gene Detail Information

> ANK3 Gene Search Result


Gene Information
Gene Name ANK3
Gene ID 288
Gene Full Name ankyrin 3
Gene Alias MRT37; ANKYRIN-G
Transcripts ENSG00000151150
Virus HBV
Gene Type protein coding
HPA Location Info Plasma membrane;
HPA Protein Class Info Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q12955
HGNC ID HGNC:494
VEGA ID OTTHUMG00000018288
OMIM ID 600465
String ID 9606.ENSP00000280772
PharmGKB ID PA24800
Target gene [ANK3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011492 chr10 6 3 9 View
1011760 chr10 6 2 8 View
1011920 chr10 5 3 8 View
1012499 chr10 5 1 6 View
1015575 chr10 2 2 View
1016014 chr10 1 1 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ANK3 expression and immune infiltrating cell level correlation result in HBV+ samples
ANK3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).