HBV Target gene Detail Information

> ANK2 Gene Search Result


Gene Information
Gene Name ANK2
Gene ID 287
Gene Full Name ankyrin 2
Gene Alias LQT4; ANK-2; brank-2
Transcripts ENSG00000145362
Virus HBV
Gene Type protein coding
HPA Location Info Plasma membrane;
HPA Protein Class Info Disease related genes, Plasma proteins, Potential drug targets, Predicted intracellular proteins, Transporters
Uniport_ID Q01484
HGNC ID HGNC:493
VEGA ID OTTHUMG00000132912
OMIM ID 106410
String ID 9606.ENSP00000349588
PharmGKB ID PA24799
Target gene [ANK2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001218 chr11 237 286 378 901 View
1005486 chr11 45 8 53 View
1007755 chr11 14 6 4 24 View
1008899 chr11 16 2 18 View
1010740 chr11 10 1 11 View
1011828 chr11 5 3 8 View
1012865 chr4 6 6 View
1403510 chr11 16 2 18 View
1403632 chr11 45 8 53 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ANK2 expression and immune infiltrating cell level correlation result in HBV+ samples
ANK2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).