HIV Target gene Detail Information

> ALMS1 Gene Search Result


Gene Information
Gene Name ALMS1
Gene ID 7840
Gene Full Name ALMS1, centrosome and basal body associated protein
Gene Alias ALSS
Transcripts ENSG00000116127
Virus HIV
Gene Type protein coding
HPA Location Info Centrosome;Cytosol;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
HGNC ID HGNC:428
VEGA ID OTTHUMG00000152812
OMIM ID 606844
String ID 9606.ENSP00000482968
PharmGKB ID PA24721
Target gene [ALMS1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001914 chr2 110 13 123 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).