HBV Target gene Detail Information

> ALG13 Gene Search Result


Gene Information
Gene Name ALG13
Gene ID 79868
Gene Full Name ALG13, UDP-N-acetylglucosaminyltransferase subunit
Gene Alias CDG1S; EIEE36; MDS031; TDRD13; CXorf45; GLT28D1; YGL047W
Transcripts ENSG00000101901
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;Cytosol;
HPA Protein Class Info Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
Uniport_ID Q9NP73
HGNC ID HGNC:30881
VEGA ID OTTHUMG00000022209
OMIM ID 300776
String ID 9606.ENSP00000378260
PharmGKB ID PA162376235
Target gene [ALG13] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009928 chrX 8 6 14 View
1014261 chrX 3 1 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ALG13 expression and immune infiltrating cell level correlation result in HBV+ samples
ALG13 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).