HBV Target gene Detail Information

> ALG10B Gene Search Result


Gene Information
Gene Name ALG10B
Gene ID 144245
Gene Full Name ALG10B, alpha-1,2-glucosyltransferase
Gene Alias KCR1; ALG10
Transcripts ENSG00000175548
Virus HBV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted membrane proteins
Uniport_ID Q5I7T1
HGNC ID HGNC:31088
VEGA ID OTTHUMG00000169298
OMIM ID 603313
String ID 9606.ENSP00000310120
PharmGKB ID PA134936082
Target gene [ALG10B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008642 chr12 11 5 4 20 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ALG10B expression and immune infiltrating cell level correlation result in HBV+ samples
ALG10B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).