HPV Target gene Detail Information

> ALDH1L1-AS2 Gene Search Result


Gene Information
Gene Name ALDH1L1-AS2
Gene ID 100862662
Transcripts ENSG00000246022
Virus HPV
Gene Type ncRNA
HPA Location Info
HGNC ID HGNC:42446
lncRNASNP2 ID NONHSAG035965.2
Target gene [ALDH1L1-AS2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5200161 chr3 59 59 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of ALDH1L1-AS2 expression and immune infiltrating cell level correlation result in HPV+ samples
ALDH1L1-AS2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).