HBV Target gene Detail Information

> AHDC1 Gene Search Result


Gene Information
Gene Name AHDC1
Gene ID 27245
Gene Full Name AT-hook DNA binding motif containing 1
Gene Alias MRD25
Transcripts ENSG00000126705
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q5TGY3
HGNC ID HGNC:25230
VEGA ID OTTHUMG00000003398
OMIM ID 615790
String ID 9606.ENSP00000363123
PharmGKB ID PA142672633
Target gene [AHDC1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004597 chr1 12 18 46 76 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of AHDC1 expression and immune infiltrating cell level correlation result in HBV+ samples
AHDC1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).