HTLV1 Target gene Detail Information

> AGPS Gene Search Result


Gene Information
Gene Name AGPS
Gene ID 8540
Gene Full Name alkylglycerone phosphate synthase
Gene Alias ADAS; ADPS; RCDP3; ADAP-S; ADHAPS; ALDHPSY
Transcripts ENSG00000018510
Virus HTLV1
Gene Type protein coding
HPA Location Info Peroxisomes;
HPA Protein Class Info Disease related genes, Enzymes, Plasma proteins, Potential drug targets, Predicted intracellular proteins
Uniport_ID O00116
HGNC ID HGNC:327
VEGA ID OTTHUMG00000132530
OMIM ID 603051
String ID 9606.ENSP00000264167
PharmGKB ID PA24624
Target gene [AGPS] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6009722 chr2 21 4 10 35 View
6024638 chr2 2 1 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO) HTLV-1 associated myelopathy 39 Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO) HTLV-1 associated myelopathy 35 Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of AGPS expression and immune infiltrating cell level correlation result in HTLV1+ samples
AGPS expression: Low -> High

> Dataset: GSE29312

HeatMap of cell type fractions in all samples Lollipop of AGPS expression and immune infiltrating cell level correlation result in HTLV1+ samples
AGPS expression: Low -> High

> Dataset: GSE29332

HeatMap of cell type fractions in all samples Lollipop of AGPS expression and immune infiltrating cell level correlation result in HTLV1+ samples
AGPS expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).