HBV Target gene Detail Information

> AGBL1 Gene Search Result


Gene Information
Gene Name AGBL1
Gene ID 123624
Gene Full Name ATP/GTP binding protein like 1
Gene Alias CCP4; FECD8
Transcripts ENSG00000273540
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
Uniport_ID Q96MI9
HGNC ID HGNC:26504
VEGA ID OTTHUMG00000149978
OMIM ID 615496
String ID 9606.ENSP00000413001
PharmGKB ID PA134923894
Target gene [AGBL1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007875 chr15 11 13 24 View
1011188 chr15 8 2 10 View
1012037 chr15 6 1 7 View
1015032 chr15 2 1 3 View
1019755 chr15 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of AGBL1 expression and immune infiltrating cell level correlation result in HBV+ samples
AGBL1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).