HTLV1 Target gene Detail Information

> AFF3 Gene Search Result


Gene Information
Gene Name AFF3
Gene ID 3899
Gene Full Name AF4/FMR2 family member 3
Gene Alias LAF4; MLLT2-like
Transcripts ENSG00000144218
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;
HPA Protein Class Info Cancer-related genes, Predicted intracellular proteins
Gene Function Oncogene
Uniport_ID P51826
HGNC ID HGNC:6473
VEGA ID OTTHUMG00000153011
OMIM ID 601464
String ID 9606.ENSP00000386834
PharmGKB ID PA30264
Target gene [AFF3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002936 chr2 142 45 10 197 View
6009601 chr2 25 8 3 36 View
6017069 chr2 9 2 11 View
6028396 chr2 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).