HIV Target gene Detail Information

> ADAMTS9-AS2 Gene Search Result


Gene Information
Gene Name ADAMTS9-AS2
Gene ID 100507098
Transcripts ENSG00000241684
Virus HIV
Gene Type ncRNA
HPA Location Info
Gene Function Suppressor gene
HGNC ID HGNC:42435
lncRNASNP2 ID NONHSAG035335.2
Target gene [ADAMTS9-AS2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4010800 chr3 5 1 2 8 View
4011395 chr3 7 7 View
4015376 chr3 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ADAMTS9-AS2 expression and immune infiltrating cell level correlation result in HIV+ samples
ADAMTS9-AS2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).