HBV Target gene Detail Information

> ADAMTS19 Gene Search Result


Gene Information
Gene Name ADAMTS19
Gene ID 171019
Gene Full Name ADAM metallopeptidase with thrombospondin type 1 motif 19
Transcripts ENSG00000145808
Virus HBV
Gene Type protein coding
HPA Location Info Midbody;Vesicles;Predicted to be secreted;
HPA Protein Class Info Predicted secreted proteins
Uniport_ID Q8TE59
HGNC ID HGNC:17111
VEGA ID OTTHUMG00000128990
OMIM ID 607513
String ID 9606.ENSP00000274487
PharmGKB ID PA24545
Target gene [ADAMTS19] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011905 chr5 3 5 8 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ADAMTS19 expression and immune infiltrating cell level correlation result in HBV+ samples
ADAMTS19 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).