HBV Target gene Detail Information

> ACSM2A Gene Search Result


Gene Information
Gene Name ACSM2A
Gene ID 123876
Gene Full Name acyl-CoA synthetase medium chain family member 2A
Gene Alias ACSM2; A-923A4.1
Transcripts ENSG00000183747
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q08AH3
HGNC ID HGNC:32017
VEGA ID OTTHUMG00000177401
OMIM ID 614358
String ID 9606.ENSP00000459451
PharmGKB ID PA162375402
Target gene [ACSM2A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010513 chr16 7 4 1 12 View
1012678 chr16 2 4 6 View
1012910 chr16 2 4 6 View
1013029 chr16 1 3 2 6 View
1017484 chr16 1 1 View
1404484 chr16 2 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ACSM2A expression and immune infiltrating cell level correlation result in HBV+ samples
ACSM2A expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).