HBV Target gene Detail Information

> ACSF3 Gene Search Result


Gene Information
Gene Name ACSF3
Gene ID 197322
Gene Full Name acyl-CoA synthetase family member 3
Transcripts ENSG00000176715
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q4G176
HGNC ID HGNC:27288
VEGA ID OTTHUMG00000138044
OMIM ID 614245
String ID 9606.ENSP00000479130
PharmGKB ID PA162375375
Target gene [ACSF3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000265 chr16 2345 785 170 3300 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ACSF3 expression and immune infiltrating cell level correlation result in HBV+ samples
ACSF3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).