HBV Target gene Detail Information

> ACSBG2 Gene Search Result


Gene Information
Gene Name ACSBG2
Gene ID 81616
Gene Full Name acyl-CoA synthetase bubblegum family member 2
Gene Alias BGR; BRGL; PRTDNY3; PRTD-NY3
Transcripts ENSG00000130377
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5FVE4
HGNC ID HGNC:24174
VEGA ID OTTHUMG00000180754
OMIM ID 614363
String ID 9606.ENSP00000465589
PharmGKB ID PA142672649
Target gene [ACSBG2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005101 chr19 56 5 61 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ACSBG2 expression and immune infiltrating cell level correlation result in HBV+ samples
ACSBG2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).