HIV Target gene Detail Information

> ACBD5 Gene Search Result


Gene Information
Gene Name ACBD5
Gene ID 91452
Gene Full Name acyl-CoA binding domain containing 5
Transcripts ENSG00000107897
Virus HIV
Gene Type protein coding
HPA Location Info Peroxisomes;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5T8D3
HGNC ID HGNC:23338
VEGA ID OTTHUMG00000017854
OMIM ID 616618
String ID 9606.ENSP00000379568
PharmGKB ID PA134892991
Target gene [ACBD5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4005937 chr10 28 28 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ACBD5 expression and immune infiltrating cell level correlation result in HIV+ samples
ACBD5 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of ACBD5 expression and immune infiltrating cell level correlation result in HIV+ samples
ACBD5 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).