HBV Target gene Detail Information

> ACAP2 Gene Search Result


Gene Information
Gene Name ACAP2
Gene ID 23527
Gene Full Name ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
Gene Alias CENTB2; CNT-B2
Transcripts ENSG00000114331
Virus HBV
Gene Type protein coding
HPA Location Info Endosomes;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q15057
HGNC ID HGNC:16469
VEGA ID OTTHUMG00000155885
OMIM ID 607766
String ID 9606.ENSP00000324287
PharmGKB ID PA26407
Target gene [ACAP2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006511 chr3 37 37 View
1006512 chr3 37 37 View
1012477 chr3 6 1 7 View
1017385 chr3 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ACAP2 expression and immune infiltrating cell level correlation result in HBV+ samples
ACAP2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).