HBV Target gene Detail Information

> ABLIM3 Gene Search Result

Gene Information

Gene Name	ABLIM3
Gene ID	22885
Gene Full Name	actin binding LIM protein family member 3
Gene Alias	HMFN1661
Transcripts	ENSG00000173210
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Plasma membrane;Cell Junctions;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	O94929
HGNC ID	HGNC:29132
VEGA ID	OTTHUMG00000129932
OMIM ID	611305
String ID	9606.ENSP00000425394
PharmGKB ID	PA134962761

Target gene [ABLIM3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1002402	chr5	29	68	183	280	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of ABLIM3 expression and immune infiltrating cell level correlation result in HBV+ samples
ABLIM3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).