HIV Target gene Detail Information

> ABI1 Gene Search Result

Gene Information

Gene Name	ABI1
Gene ID	10006
Gene Full Name	abl interactor 1
Gene Alias	E3B1; ABI-1; ABLBP4; NAP1BP; SSH3BP; SSH3BP1
Transcripts	ENSG00000136754
Virus	HIV
Gene Type	protein coding
HPA Location Info	Plasma membrane;
HPA Protein Class Info	Cancer-related genes, Disease related genes, Predicted intracellular proteins
Uniport_ID	Q8IZP0
HGNC ID	HGNC:11320
VEGA ID	OTTHUMG00000017848
OMIM ID	603050
String ID	9606.ENSP00000365312
PharmGKB ID	PA36144

Target gene [ABI1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005549	chr10	31			31	View
4013138	chr10	3	1		4	View
4014320	chr10		2		2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ABI1 expression and immune infiltrating cell level correlation result in HIV+ samples
ABI1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of ABI1 expression and immune infiltrating cell level correlation result in HIV+ samples
ABI1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).