HPV Target gene Detail Information

> ABHD17B Gene Search Result


Gene Information
Gene Name ABHD17B
Gene ID 51104
Gene Full Name abhydrolase domain containing 17B
Gene Alias CGI-67; C9orf77; FAM108B1
Transcripts ENSG00000107362
Virus HPV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q5VST6
HGNC ID HGNC:24278
VEGA ID OTTHUMG00000020001
OMIM ID 617943
String ID 9606.ENSP00000366240
PharmGKB ID PA162385624
Target gene [ABHD17B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001683 chr9 24 1 25 View
5001684 chr9 24 1 25 View
5001687 chr9 24 1 25 View
5001695 chr9 24 1 25 View
5001843 chr9 19 2 21 View
5001844 chr9 19 2 21 View
5001847 chr9 19 2 21 View
5001852 chr9 19 2 21 View
5200813 chr9 5 3 8 View
5401917 chr9 19 2 21 View
5402342 chr9 19 2 21 View
5402947 chr9 25 2 27 View
5402970 chr9 25 2 27 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of ABHD17B expression and immune infiltrating cell level correlation result in HPV+ samples
ABHD17B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).