HIV Target gene Detail Information

> ABHD13 Gene Search Result


Gene Information
Gene Name ABHD13
Gene ID 84945
Gene Full Name abhydrolase domain containing 13
Gene Alias BEM46L1; C13orf6; bA153I24.2
Transcripts ENSG00000139826
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q7L211
HGNC ID HGNC:20293
VEGA ID OTTHUMG00000017330
String ID 9606.ENSP00000365063
PharmGKB ID PA134862303
Target gene [ABHD13] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4014599 chr13 1 1 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ABHD13 expression and immune infiltrating cell level correlation result in HIV+ samples
ABHD13 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).