HBV Target gene Detail Information

> ABCG8 Gene Search Result


Gene Information
Gene Name ABCG8
Gene ID 64241
Gene Full Name ATP binding cassette subfamily G member 8
Gene Alias GBD4; STSL
Transcripts ENSG00000143921
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Potential drug targets, Predicted membrane proteins, Transporters
Uniport_ID Q9H221
HGNC ID HGNC:13887
VEGA ID OTTHUMG00000128756
OMIM ID 605460
String ID 9606.ENSP00000272286
Drugbank ID BE0004751
PharmGKB ID PA24412
Target gene [ABCG8] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000699 chr2 128 988 469 1585 View
1001012 chr2 132 733 285 1150 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ABCG8 expression and immune infiltrating cell level correlation result in HBV+ samples
ABCG8 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).