HBV Target gene Detail Information

> ABCC2 Gene Search Result


Gene Information
Gene Name ABCC2
Gene ID 1244
Gene Full Name ATP binding cassette subfamily C member 2
Gene Alias DJS; MRP2; cMRP; ABC30; CMOAT
Transcripts ENSG00000023839
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Cancer-related genes, Disease related genes, FDA approved drug targets, Plasma proteins, Predicted membrane proteins, Transporters
Uniport_ID Q92887
HGNC ID HGNC:53
VEGA ID OTTHUMG00000018895
OMIM ID 601107
String ID 9606.ENSP00000359478
Drugbank ID BE0001069
PharmGKB ID PA116
Target gene [ABCC2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002556 chr10 25 113 110 248 View
1015133 chr10 2 1 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ABCC2 expression and immune infiltrating cell level correlation result in HBV+ samples
ABCC2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).