HBV Target gene Detail Information

> ABCC10 Gene Search Result


Gene Information
Gene Name ABCC10
Gene ID 89845
Gene Full Name ATP binding cassette subfamily C member 10
Gene Alias MRP7; SIMRP7; EST182763
Transcripts ENSG00000124574
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q5T3U5
HGNC ID HGNC:52
VEGA ID OTTHUMG00000014733
OMIM ID 612509
String ID 9606.ENSP00000361608
Drugbank ID BE0003651
PharmGKB ID PA24392
Target gene [ABCC10] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1401751 chr6 41 15 56 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ABCC10 expression and immune infiltrating cell level correlation result in HBV+ samples
ABCC10 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).