HBV Target gene Detail Information

> ABCB8 Gene Search Result


Gene Information
Gene Name ABCB8
Gene ID 11194
Gene Full Name ATP binding cassette subfamily B member 8
Gene Alias MABC1; M-ABC1; EST328128
Transcripts ENSG00000197150
Virus HBV
Gene Type protein coding
HPA Location Info Mitochondria;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q9NUT2
HGNC ID HGNC:49
VEGA ID OTTHUMG00000158686
OMIM ID 605464
String ID 9606.ENSP00000297504
Drugbank ID BE0003673
PharmGKB ID PA24390
Target gene [ABCB8] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006072 chr7 44 44 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ABCB8 expression and immune infiltrating cell level correlation result in HBV+ samples
ABCB8 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).