HBV Target gene Detail Information

> ABCA4 Gene Search Result

Gene Information

Gene Name	ABCA4
Gene ID	24
Gene Full Name	ATP binding cassette subfamily A member 4
Gene Alias	FFM; RMP; ABCR; RP19; STGD; ABC10; ARMD2; CORD3; STGD1
Transcripts	ENSG00000198691
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Disease related genes, Plasma proteins, Potential drug targets, Predicted membrane proteins, Transporters
Uniport_ID	P78363
HGNC ID	HGNC:34
VEGA ID	OTTHUMG00000010622
OMIM ID	601691
String ID	9606.ENSP00000359245
PharmGKB ID	PA24379

Target gene [ABCA4] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1005383	chr1	42	12	1	55	View
1009102	chr1	4	13		17	View
1009753	chr1	3	11		14	View
1402219	chr1	4	13		17	View
1402220	chr1	3	11		14	View
1402936	chr1	42	12	1	55	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of ABCA4 expression and immune infiltrating cell level correlation result in HBV+ samples
ABCA4 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).