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HIV Target gene Detail Information

> ABCA11P Gene Search Result


Gene Information
Gene Name ABCA11P
Gene ID 79963
Gene Alias ABCA11; EST1133530
Transcripts ENSG00000251595
Virus HIV
Gene Type pseudo
HPA Location Info
HGNC ID HGNC:31
PharmGKB ID PA24375
Target gene [ABCA11P] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4014469 chr4 1 1 2 View
4015845 chr4 0 View
4015846 chr4 0 View
4015847 chr4 0 View
4015848 chr4 0 View
4015849 chr4 0 View
4015850 chr4 0 View
4015851 chr4 0 View
4015852 chr4 0 View
4015853 chr4 0 View
4015854 chr4 0 View
4015855 chr4 0 View
4015856 chr4 0 View
4015857 chr4 0 View
4015858 chr4 0 View
4015859 chr4 0 View
4015860 chr4 0 View
4015861 chr4 0 View
4015862 chr4 0 View
4015863 chr4 0 View
4015864 chr4 0 View
4100038 chr4 20 20 View
4300001 chr4 20 20 View
4300004 chr4 2 1 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ABCA11P expression and immune infiltrating cell level correlation result in HIV+ samples
ABCA11P expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).