HPV Mutation Detail Information

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Mutation Information
Mutation Site C5225A
Mutation Type Nucleotide level
Gene/Protein/Region Type L2
Genotype/Subtype HPV18
Viral Reference AY262282
Country Costa Rica;Taiwan;Thailand;Rwanda;Burkina Faso;Zambia
Literature Information
PubMed PMID 23977318
Disease HPV infection
Published Year 2013
Journal PloS one
Title Evolution and taxonomic classification of alphapapillomavirus 7 complete genomes: HPV18, HPV39, HPV45, HPV59, HPV68 and HPV70.
Author Chen Z,Schiffman M,Herrero R,DeSalle R,Anastos K,Segondy M,Sahasrabuddhe VV,Gravitt PE,Hsing AW,Burk RD
Evidence Lineage C variants could be distinguished by 23 SNPs throughout the complete genome (E6 - G437A; E1 - T1526C, A1636G; E2 – G3757C, C3790T; E5 – T3942C, T3963G; L2- T4423G, G4486A, A4513T, A4726G, G5191A, C5225A, G5351A; L1 – A5638G, G5764A, A5880G, T5942G, A6224T, T6536C, A6644C, A6845C; and URR- T7475G), while lineages A and B had 62 and 33 lineage specific nucleotide variations, respectively (Figure S1A and Figure S2).

Contents
Description
Mutation Information Note
  • Gene/Protein/Region Type: Virus Gene (e.g. LMP-1) or Virus Protein (e.g. Rep 68) or Virus Region (e.g. S, X)
Literature Information Note
  • Evidence: sentence contains this mutation information in the citation