SARS_CoV_2 mutation literature information.


  Spatial epidemiology and genetic diversity of SARS-CoV-2 and related coronaviruses in domestic and wild animals.
 PMID: 34910734       2021       PloS one
Result: Other commonly found mutations were Y453F (50.3%), S194L (49.4%), R203K (49.1%), and G204R (47.6%) in N protein of mink (Fig 13).


  Case Report: Genomic Characteristics of the First Known Case of SARS-CoV-2 Imported From Spain to Sichuan, China.
 PMID: 34917639       2021       Frontiers in medicine
Introduction: In addition, an Nsp12 mutation (P323L) and N protein double mutations (R203K and G204R) were also found.
Result: In addition, these mutations were expressed as amino acid changes in the spike (D614G), Nsp12 (P323L), and N proteins (R203K and G204R).
Discussion: Siqi suggested that R203K and G204R mutations could change viral protein structure, binding affinity, and hot spots of the interface, thereby impact on SARS-CoV-2 transmission, diagnosis, and treatment of  PMID: 35004593       2021       Frontiers in public health
Result: As showed in Figure 3, two amino acid substitutions occurred in N gene, such as p.Gli204Arg substitution in 46 SARS-COV-2 samples (16%) and p.Arg203Lys in 46 SARS-COV-2 samples (17%).


  The Rapid Antigen Detection Test for SARS-CoV-2 Underestimates the Identification of COVID-19 Positive Cases and Compromises the Diagnosis of the SARS-CoV-2 (K417N/T, E484K, and N501Y) Variants.
 PMID: 35047474       2021       Frontiers in public health
Discussion: These data further suggest that this rapid antigen test could also fail to detect other variants, such as delta (B.1.617.2), because, in addition of Spike protein mutations, the delta variant also has mutations in the N protein (different to R203K).
Discussion: This kind of detection can explain the low capacity of RAT to detect the variants, which has the substitutions P80R and R203K in the N protein.


  Omicron: A Heavily Mutated SARS-CoV-2 Variant Exhibits Stronger Binding to ACE2 and Potently Escapes Approved COVID-19 Therapeutic Antibodies.
 PMID: 35140714       2021       Frontiers in immunology
Introduction: Omicron also had mutations in the other structural proteins, including Envelope (E) (T9I), Membrane (M) (D3G, Q19E, and A63T), and Nucleocapsid (N) (P13L, Delta31-33, R203K, G204R), further enhancing their infectivity.


  Mutations in SARS-CoV-2 viral RNA identified in Eastern India: Possible implications for the ongoing outbreak in India and impact on viral structure and host susceptibility.
 PMID: 32515358       2020       Journal of biosciences
Table:
Figure: (B) 28881-3 GGG/AAC (R203K and G204R)) mutations in the nucleocapside protein coding gene in Clustal Omega.
Figure: (Bottom) This panel shows the domain organization of the variant SARS-CoV-2 N-protein with mutations at position 203 and 204 (R203K, G204R).


  SARS-CoV-2 genomic surveillance in Taiwan revealed novel ORF8-deletion mutant and clade possibly associated with infections in Middle East.
 PMID: 32543353       2020       Emerging microbes & infections
Result: We further found 4 Taiwanese strains (CGMH-CGU-12, -13, -18, and -20, top four in Figure 3E) shared the same N gene mutations R203K and G204R resulting from 3 nucleotide mutations G608A, G609A, and G610C.


  Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey.
 PMID: 32595354       2020       Turkish journal of biology
Table: R203K
Discussion: These mutations were due to nucleotide substitutions in 3 nucleotides in order where 2 of them (G28881A and G28882A) results in arginine to lysine (R203K) substitution and the third one (G28883C) results in glycine to arginine (G204R) in the nucleocapsid phosphoprotein, where both substituted amino acids differ from their original amino acids in means of their isoelectric points (Pachetti et al., 2020) (Table 1).


  SARS-CoV-2 genomic variations associated with mortality rate of COVID-19.
 PMID: 32699345       2020       Journal of human genetics
Result: In the cluster 2, K/R variants of N protein R203K/G204R mutations were significantly enriched at 43.1%, compared with the other clusters (5.2%, P = 0.00011 for the cluster 1 and 11.8%, P = 5.6 x 10-7 for the cluster 3; Supplementary.


  Molecular Epidemiology Analysis of SARS-CoV-2 Strains Circulating in Romania during the First Months of the Pandemic.
 PMID: 32823907       2020       Life (Basel, Switzerland)
Result: The frequency of R203K and G204R variants in the GISAID database mutational statistics is 23.6% (n = 12,784).
Result: The sequences from the BMA presented specific mutations: G28881A, G28882A (R203K in N gene) and G28883C (G204R in N gene).



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