literature

SARS_CoV_2 mutation literature information.

High-precision and cost-efficient sequencing for real-time COVID-19 surveillance.

PMID: 34211026 2021 Scientific reports

Result: Eight other sequences had mutations of T85I in the NSP2 protein and Q57H in the ORF3a protein (red circle in.

Result: In USA and California, the prevalence of T85I in NSP2 and Q57H in ORF3a were observed to be above 40%, as shown in.

Discussion: In addition to the G clade's other common mutation, NSP12-P323L, frequent mutations we observed include N-S194L, N-R203K, N-G204R, NSP

Genomic monitoring unveil the early detection of the SARS-CoV-2 B.1.351 (beta) variant (20H/501Y.V2) in Brazil.

PMID: 34241897 2021 Journal of medical virology

Result: The B.1.351 VOC was characterized by K417N, E484K, N501Y in the spike region and 19 mutations and 2 deletions as follows: ORF1ab: T265I, R724K, S1612L, K1655N, K3353R, SGF 3675_F3677del, P4715L, E5585D; spike: D80A, D215G, L242_L244del, A262D, D614G, C1247F; ORF3a: Q57H,

PMID: 34258267 2021 BioMed research international

Abstract: Four hotspot mutations were found in all geographical locations at least once: T265I (NSP2), P314L (NSP12), D614G (S), and Q57H (ORF3a).

Coding-Complete Genome Sequences of 11 SARS-CoV-2 B.1.1.7 and B.1.351 Variants from Metro Manila, Philippines.

PMID: 34264104 2021 Microbiology resource announcements

Table: Q57H

Evolutionary Tracking of SARS-CoV-2 Genetic Variants Highlights an Intricate Balance of Stabilizing and Destabilizing Mutations.

PMID: 34281387 2021 mBio

Abstract: In addition, a retention of Q57H (B.1.X), R203K/G204R (B.1.1.X), T85I (B.1.2-B.1.3), G15S+T428I (C.X), and I120F (D.X) variations was observed.

Result: Other major mutations noted are Q57H (26.5%),

Table: Q57H

Ongoing global and regional adaptive evolution of SARS-CoV-2.

PMID: 34292871 2021 Proc Natl Acad Sci U S A

Result: Q57H is the fourth most common positively selected mutation.

Result: In addition to the many mutations of interest in the N and S proteins, Orf3a Q57H is a signature mutation for partitions 6, 7, and v1.

Near-Complete Genome Sequences of Nine SARS-CoV-2 Strains Harboring the D614G Mutation in Malaysia.

PMID: 34351228 2021 Microbiology resource announcements

Table: Q57H

Correlates of SARS-CoV-2 Variants on Deaths, Case Incidence and Case Fatality Ratio among the Continents for the Period of 1 December 2020 to 15 March 2021.

PMID: 34356077 2021 Genes

Result: The NS3_Q57H mutation was reported at 46.10%, 32.99% and 63.30% in SARS-CoV-2 genome sequences isolated from Africa, Australia and North America, respectively.

Emergence and expansion of SARS-CoV-2 B.1.526 after identification in New York.

PMID: 34428777 2021 Nature

Introduction: Non-spike mutations widely shared by B.1.526-E484K and B.1.526-S477N isolates include: T85I in ORF1a-nsp2; L438P in ORF1a-nsp4, a 9-base pair (bp) deletion (Delta106-108) in ORF1a-nsp6; P323L in ORF1b-nsp12; Q88H in ORF1b-nsp13; Q57H in ORF3a; and P199L and M234I in the N<

Molecular Epidemiology of SARS-CoV-2 in Diverse Environmental Samples Globally.

PMID: 34442775 2021 Microorganisms

Result: On the other hand, the NS3 and NS8 protein of environmental strains showed frequent mutations at Q57H and Q27stop, respectively.

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