SARS_CoV_2 mutation literature information.


  SARS-CoV-2 B.1.617.2 Delta variant replication and immune evasion.
 PMID: 34488225       2021       Nature
Introduction: The B.1.617.1 and B.1.617.2 spike proteins mediated higher fusion activity and syncytium formation than WT, probably mediated by P681R (Extended Data.


  Impact of the Delta variant on vaccine efficacy and response strategies.
 PMID: 34488546       2021       Expert review of vaccines
Introduction: P681R/P681H also exists in several variants under investigati
Introduction: A pseudovirus neutralization test showed that the D614G/P681R virus has partial (1.2-1.5 times) resistance to three monoclonal antibodies against the RBD of SARS-CoV-2 S protein.
Introduction: An in vitro study has shown that the P681R mutation does not increase infectivity; however, the mutant virus shows higher pathogenicity than that of the parent SARS-CoV-2 virus in infected hamsters.


  Possible Link between Higher Transmissibility of Alpha, Kappa and Delta Variants of SARS-CoV-2 and Increased Structural Stability of Its Spike Protein and hACE2 Affinity.
 PMID: 34502041       2021       International journal of molecular sciences
Introduction: All these lineages have conserved L452R, D614G and P681R (accessed on 6 June 2021).
Introduction: The Kappa is characterized by E154K, L452R, E484Q, D614G, P681R, Q1071H mutations in the spike protein and Delta by T19R, L452R, T478K, D614G, P681R, D950N mutations while the B.1.617.3 lineage has T19R, L452R, E484Q


  Dynamics prediction of emerging notable spike protein mutations in SARS-CoV-2 implies a need for updated vaccines.
 PMID: 34508827       2021       Biochimie
Figure: * The codes on the x and y axes of the matrix include: s001A: 20A, s002A: 19A, s003A: 20A/S.A262S, s004A: 20A/S.A701V, s005A: 20A/S.D80A, s006A: 20A/S.E484K, s007A: 20A/S.E484Q, s008A: 20A/S.K417 N, s009A: 20A/S.L452R, s010A: 20A/S.N501T, s011A: 20A/S.N501Y, s012A: 20A/S.P681H, s013A: 20A/S.P681R, s014A: 20A/S.Q675H, s015A: 20A/S.Q675P, s016A: 20A/S.Q677H, s017A: 20A/S.Q677P, s018A: 20A/S.V1176F, s019A: 20A/S.A222V, s020A: 20A/S.


  The in vitro and in vivo efficacy of CT-P59 against Gamma, Delta and its associated variants of SARS-CoV-2.
 PMID: 34547629       2021       Biochemical and biophysical research communications
Introduction: Delta and Kappa have a P681R mutation at furin cleavage sites (681PRRAR/S686).
Introduction: Recent studies showed that P681R enhances spike cleavage and fusion for viral entry, suggesting augmented transmissibility and pathogenicity.
Introduction: The Delta has L452R, T478K and P681R in the spike protein (Table 1 ) which may contribute to increased infectivity, pathogenicity and immune evasion, resulting in re-infection or resistance to vaccine-elicited antibody and therapeutic antibodies.


  Serum Neutralizing Activity of mRNA-1273 against SARS-CoV-2 Variants.
 PMID: 34549975       2021       Journal of virology
Table: P681R


  Clinical Characterization and Genomic Analysis of Samples from COVID-19 Breakthrough Infections during the Second Wave among the Various States of India.
 PMID: 34578363       2021       Viruses
Result: Common in B.1.617.2 lineage: ORF1ab P4715L; spikeT19R, L452R, T478K, D614G, and P681R; ORF3a S26L; M I82T; ORF7a V82A and T120I; and N D63G, R203M, and D377Y.


  Emergence and Spread of a B.1.1.28-Derived P.6 Lineage with Q675H and Q677H Spike Mutations in Uruguay.
 PMID: 34578382       2021       Viruses
Discussion: Consistent with this notion, a recent study that used a reverse genetic system and primary human airway cultures identified mutation S:P681R as a significant determinant for enhanced viral replication fitness of the VOC Delta, and supported that Spike mutations that potentially affect furin cleavage efficiency must be closely monitored for future variant surveillance.
Discussion: Moreover, mutations close to or at the polybasic cleavage site at the S1/S2 boundary have been reported in several VOCs and VOIs, including: Alpha (S:P681H), Beta (A701V), Delta (P681R), Eta (Q677H), Iota (A701V), Kappa (P681R), and Theta (P.3,  PMID: 34601723       2021       The EMBO journal
Discussion: Indeed, the analogous P681R mutation present in B.1.617.2 and B.1.617.3 variants increases S1/S2 cleavage and facilitates syncytia formation (Jiang et al,; preprint: Ferreira et al,).


  Evaluation of the clinical and analytical performance of the Seegene allplex SARS-CoV-2 variants I assay for the detection of variants of concern (VOC) and variants of interests (VOI).
 PMID: 34628158       2021       Journal of clinical virology
Table: P681R



Browser Board

 Co-occurred Entities




   Filtrator