SARS_CoV_2 mutation literature information.


  Nanobodies from camelid mice and llamas neutralize SARS-CoV-2 variants.
 PMID: 34098567       2021       Nature
Introduction: P.1, a third variant that spread rapidly in Brazil, shows changes similar to those of B.1.1.7 and B.1.351: N501Y, K417T and E484K.


  Characterization of SARS-CoV-2 different variants and related morbidity and mortality: a systematic review.
 PMID: 34103090       2021       European journal of medical research
Table: K417T


  SARS-CoV-2 Brazil variants in Latin America: More serious research urgently needed on public health and vaccine protection.
 PMID: 34109031       2021       Annals of medicine and surgery (2012)
Abstract: The essential modifications located in the spike glycoprotein RBD include E484K, K417T and N501Y.
Introduction: The essential mutations in the spike include the glycoprotein RBD, E484K, K417T, and N501Y.


  Potent RBD-specific neutralizing rabbit monoclonal antibodies recognize emerging SARS-CoV-2 variants elicited by DNA prime-protein boost vaccination.
 PMID: 34120577       2021       Emerging microbes & infections
Result: For Brazil P.1 with three RBD mutations (K417T/E484K/N501Y), only 1H1 was found to mediate neutralization in our study.


  Rapid Increase of SARS-CoV-2 Variant B.1.1.7 Detected in Sewage Samples from England between October 2020 and January 2021.
 PMID: 34128696       2021       mSystems
Introduction: Amino acid substitutions at residue 417, K417N in B.1.351 and K417T in P.1, appear to improve evasion from antibodies in combination with N501Y and E484K.
Introduction: B.1.351 and P.1 variants have two more spike mutations of biological significance: E484K and K417N/T, both located in the RBD and both important for ACE-2 binding and antibody recognition.


  Characterization of a new SARS-CoV-2 variant that emerged in Brazil.
 PMID: 34140350       2021       Proc Natl Acad Sci U S A
Introduction: S protein plays a key role in viral binding to host cell receptors (i.e., human angiotensin-converting enzyme 2 [hACE2]), and the P.1 variant has three mutations (K417T, E484K, and N501Y) in the receptor-binding domain (RBD).


  Recent progress on the mutations of SARS-CoV-2 spike protein and suggestions for prevention and controlling of the pandemic.
 PMID: 34146731       2021       Infection, genetics and evolution
Abstract: Among these mutations, the most representative ones are substitution mutations such as D614G, N501Y, Y453F, N439K/R, P681H, K417N/T, and E484K, and deletion mutations of DeltaH69/V70 and Delta242-244, which confer the virus with enhanced infectivity, transmissibility, and resistance to neutralization.
Introduction: The most representative ones in the spike protein are substitution mutations such as D614G, N501Y, Y453F, N439K/R, P681H, K417N/T, and


  Epitope Classification and RBD Binding Properties of Neutralizing Antibodies Against SARS-CoV-2 Variants of Concern.
 PMID: 34149735       2021       Frontiers in immunology
Result: Based on the in silico NAb epitope analysis, nine RBD variants that localize to the C1 (K417T, A475V, N501Y, Y505W), C1D/C2 (G446V, L452R and E484K) and C3 epitopes (T345I, N440Y, and G446V) were produced for binding studies with the unknown NAbs.
Result: Based on this definition, C1 Figure: The horizontal red line highlights the RBD variants (K417T, E484K, and N501Y) that disrupt the binding of the largest number of NAbs.


  Preliminary Structural Data Revealed That the SARS-CoV-2 B.1.617 Variant's RBD Binds to ACE2 Receptor Stronger Than the Wild Type to Enhance the Infectivity.
 PMID: 34160124       2021       Chembiochem
Introduction: These mutations in this strain may enhance virus transmissibility and infectivity, including the deletion of residues 69-70 and 144 and the substitution of A570D, D614G, T716I, S982A, D1118H, P681H, K417N, K417T, E484 K and N501Y.


  Allosteric Cross-Talk among Spike's Receptor-Binding Domain Mutations of the SARS-CoV-2 South African Variant Triggers an Effective Hijacking of Human Cell Receptor.
 PMID: 34161095       2021       The journal of physical chemistry letters
Introduction: In this scenario, it is tempting to argue that the BR variant, differing from the SA one only by the K417T@RBD substitution, may exploit the same strategy to foster viral propagation.



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